Your output above is consistent with you having VFs enabled but not bound to the driver.
PCI devices will show up regardless of whether a driver is using them or not.
In the post I referred to, you can see me load the driver with both probe_vf and num_vfs set to the number of VFs. The probe_vf property is what instructs the driver to bind to the VFs, only setting num_vfs would get you what you showed above.